Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | APR48_08290 | Not Available | Negative | 1780939 - 1782093 | 41253.0 |
| histidine kinase | APR48_08295 | Not Available | Negative | 1782126 - 1783949 | 66707.8 |
| luxr family transcriptional regulator | APR48_08300 | Not Available | Negative | 1784001 - 1784726 | 25785.8 |
| esterase | APR48_08305 | Not Available | Positive | 1785043 - 1785639 | 22389.8 |
| ribonuclease ii | APR48_08310 | Not Available | Positive | 1785708 - 1787780 | 74415.4 |
| energy transducer tonb | APR48_08315 | Not Available | Positive | 1787777 - 1788628 | 31538.6 |
| shikimate dehydrogenase | APR48_08320 | Not Available | Positive | 1788672 - 1789526 | 29405.1 |
| monofunctional biosynthetic peptidoglycan transglycosylase | APR48_08325 | Not Available | Positive | 1789535 - 1790278 | 27429.1 |
| hypothetical protein | APR48_08330 | Not Available | Negative | 1790223 - 1790651 | 15395.3 |
| hypothetical protein | APR48_08335 | Not Available | Positive | 1790659 - 1791306 | 23754.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
