Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_08190 | Not Available | Positive | 1757919 - 1758170 | 9117.14 |
| histidine kinase | APR48_08195 | Not Available | Positive | 1758199 - 1759905 | 61645.3 |
| fis family transcriptional regulator | APR48_08200 | Not Available | Positive | 1759910 - 1761496 | 56528.3 |
| anhydro-n-acetylmuramyl-tripeptide amidase | APR48_08205 | Not Available | Positive | 1761483 - 1762103 | 22981.5 |
| ribonucleotide-diphosphate reductase subunit alpha | APR48_08210 | Not Available | Positive | 1762456 - 1765374 | 107679.0 |
| ribonucleotide-diphosphate reductase subunit beta | APR48_08215 | Not Available | Positive | 1765589 - 1766809 | 46260.1 |
| hypothetical protein | APR48_08220 | Not Available | Negative | 1766964 - 1767500 | 17267.0 |
| sugar kinase | APR48_08225 | Not Available | Negative | 1767629 - 1768534 | 32245.6 |
| hypothetical protein | APR48_08230 | Not Available | Negative | 1768604 - 1770022 | 50963.9 |
| ribosomal protein l11 methyltransferase | APR48_08235 | Not Available | Negative | 1770111 - 1770995 | 31402.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
