Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_00080 | Not Available | Positive | 14787 - 15887 | 40259.9 |
| glutamate carboxypeptidase | APR48_00085 | Not Available | Positive | 15960 - 17258 | 46191.7 |
| lysr family transcriptional regulator | APR48_00090 | Not Available | Positive | 17266 - 18171 | 32534.9 |
| amino acid dehydrogenase | APR48_00095 | Not Available | Negative | 18299 - 19519 | 42474.2 |
| hypothetical protein | APR48_00100 | Not Available | Negative | 19654 - 20307 | 22898.7 |
| hypothetical protein | APR48_00105 | Not Available | Negative | 20304 - 21086 | 27274.7 |
| abc transporter substrate-binding protein | APR48_00110 | Not Available | Positive | 21259 - 22146 | 32111.9 |
| aspartate racemase | APR48_00115 | Not Available | Positive | 22173 - 22916 | 26215.7 |
| carboxymethylenebutenolidase | APR48_00120 | Not Available | Positive | 23059 - 23970 | 31897.8 |
| dihydroorotate dehydrogenase | APR48_00125 | Not Available | Positive | 24096 - 25079 | 34786.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
