Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione abc transporter permease | APR48_08040 | Not Available | Positive | 1723246 - 1724175 | 33270.9 |
| aminopeptidase | APR48_08045 | Not Available | Positive | 1724172 - 1725221 | 36047.1 |
| aminopeptidase | APR48_08050 | Not Available | Positive | 1725243 - 1726064 | 28997.8 |
| hypothetical protein | APR48_08055 | Not Available | Negative | 1726688 - 1727821 | 40643.4 |
| short-chain dehydrogenase | APR48_08060 | Not Available | Positive | 1727843 - 1728643 | 28072.5 |
| dihydroneopterin aldolase | APR48_08065 | Not Available | Positive | 1728687 - 1729064 | 14016.2 |
| trna 2-thiocytidine biosynthesis protein ttca | APR48_08070 | Not Available | Positive | 1729123 - 1730067 | 35163.6 |
| hypothetical protein | APR48_08075 | Not Available | Positive | 1730114 - 1730755 | 23453.7 |
| phosphoglycerate mutase | APR48_08080 | Not Available | Positive | 1730819 - 1731466 | 23978.2 |
| abc transporter permease | APR48_08085 | Not Available | Negative | 1731476 - 1732492 | 33999.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
