Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_07990 | Not Available | Negative | 1710269 - 1712041 | 64496.1 |
| hypothetical protein | APR48_07995 | Not Available | Negative | 1712090 - 1712773 | 24391.8 |
| mfs transporter | APR48_08000 | Not Available | Negative | 1713284 - 1714273 | 34783.1 |
| tartrate dehydrogenase | APR48_08005 | Not Available | Negative | 1714348 - 1715436 | 39162.0 |
| lysr family transcriptional regulator | APR48_08010 | Not Available | Positive | 1715553 - 1716491 | 33982.9 |
| transcriptional regulator | APR48_08015 | Not Available | Positive | 1716721 - 1717683 | 33813.2 |
| isoaspartyl peptidase | APR48_08020 | Not Available | Positive | 1717680 - 1718669 | 33936.2 |
| glutathione abc transporter atp-binding protein | APR48_08025 | Not Available | Positive | 1718696 - 1720588 | 68934.9 |
| glutathione abc transporter substrate-binding protein | APR48_08030 | Not Available | Positive | 1720680 - 1722233 | 57240.5 |
| glutathione abc transporter permease | APR48_08035 | Not Available | Positive | 1722315 - 1723235 | 34025.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
