Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_07940 | Not Available | Positive | 1698398 - 1699864 | 53869.6 |
| abc transporter permease | APR48_07945 | Not Available | Positive | 1699870 - 1700835 | 34885.7 |
| peptidase m20 | APR48_07950 | Not Available | Positive | 1700865 - 1702043 | 42610.9 |
| abc transporter permease | APR48_07955 | Not Available | Positive | 1702040 - 1702951 | 32122.6 |
| methionine abc transporter atp-binding protein | APR48_07960 | Not Available | Positive | 1702972 - 1703976 | 35780.7 |
| hypothetical protein | APR48_07965 | Not Available | Negative | 1704279 - 1704770 | 18026.8 |
| amidohydrolase | APR48_07970 | Not Available | Positive | 1704869 - 1706062 | 42208.4 |
| diaminopropionate ammonia-lyase | APR48_07975 | Not Available | Positive | 1706091 - 1707320 | 43566.7 |
| hypothetical protein | APR48_07980 | Not Available | Negative | 1707558 - 1708586 | 36983.1 |
| hypothetical protein | APR48_07985 | Not Available | Negative | 1708794 - 1710107 | 43273.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
