Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_07740 | Not Available | Positive | 1654546 - 1655451 | 33319.8 |
| hypothetical protein | APR48_07745 | Not Available | Negative | 1655479 - 1656633 | 41312.6 |
| hypothetical protein | APR48_07750 | Not Available | Positive | 1656941 - 1657867 | 33892.8 |
| amidase | APR48_07755 | Not Available | Positive | 1657976 - 1658587 | 22556.8 |
| hypothetical protein | APR48_07760 | Not Available | Negative | 1658611 - 1660182 | 57850.4 |
| peptidoglycan-binding protein | APR48_07765 | Not Available | Negative | 1660195 - 1660989 | 28035.5 |
| hypothetical protein | APR48_07770 | Not Available | Positive | 1661281 - 1661988 | 25446.2 |
| hypothetical protein | APR48_07775 | Not Available | Negative | 1662093 - 1663121 | 36102.9 |
| hypothetical protein | APR48_07780 | Not Available | Negative | 1663403 - 1664296 | 32437.1 |
| hypothetical protein | APR48_07785 | Not Available | Negative | 1664628 - 1667987 | 122280.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
