Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR48_07690 | Not Available | Negative | 1643944 - 1644819 | 31565.7 |
| citryl-coa lyase | APR48_07695 | Not Available | Positive | 1644896 - 1645765 | 30260.4 |
| hypothetical protein | APR48_07700 | Not Available | Positive | 1645797 - 1646771 | 33762.0 |
| formyl-coa transferase | APR48_07705 | Not Available | Positive | 1646780 - 1647937 | 42122.3 |
| 2-pyrone-4,6-dicarboxylate hydrolase | APR48_07710 | Not Available | Positive | 1647937 - 1648839 | 32252.1 |
| laci family transcriptional regulator | APR48_07715 | Not Available | Positive | 1648836 - 1649798 | 33333.3 |
| hypothetical protein | APR48_07720 | Not Available | Negative | 1650038 - 1651567 | 53737.0 |
| tripartite tricarboxylate transporter tctb | APR48_07725 | Not Available | Negative | 1651578 - 1652003 | 15138.2 |
| hypothetical protein | APR48_07730 | Not Available | Positive | 1652219 - 1653406 | 42193.6 |
| hypothetical protein | APR48_07735 | Not Available | Negative | 1653428 - 1654243 | 29596.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
