Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 5333 - 5445 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 5981 - 7523 | Not Available |
| gmp reductase | APR48_00050 | Not Available | Negative | 5892 - 6869 | 35382.7 |
| dna helicase ii | APR48_00055 | Not Available | Positive | 7089 - 9506 | 89564.2 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 8111 - 10997 | Not Available |
| hypothetical protein | APR48_00060 | Not Available | Negative | 9537 - 10367 | 29343.6 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 11131 - 11243 | Not Available |
| homoserine kinase | APR48_00065 | Not Available | Negative | 10378 - 11433 | 38691.4 |
| hypothetical protein | APR48_00070 | Not Available | Negative | 11489 - 11860 | 13027.3 |
| dna polymerase i | APR48_00075 | Not Available | Positive | 11968 - 14790 | 102747.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
