Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_07640 | Not Available | Positive | 1635142 - 1635696 | 20007.5 |
| hypothetical protein | APR48_07645 | Not Available | Positive | 1635693 - 1636046 | 12367.8 |
| zinc-binding alcohol dehydrogenase | APR48_07650 | Not Available | Negative | 1636050 - 1637012 | 33080.2 |
| 3-isopropylmalate dehydrogenase | APR48_07655 | Not Available | Negative | 1637060 - 1638145 | 38885.6 |
| 2-methylcitrate dehydratase | APR48_07660 | Not Available | Negative | 1638159 - 1639535 | 48785.3 |
| receptor | APR48_07665 | Not Available | Negative | 1639587 - 1640564 | 34458.7 |
| hypothetical protein | APR48_07670 | Not Available | Positive | 1640668 - 1641615 | 34515.2 |
| sigma factor sigb regulation protein rsbq | APR48_07675 | Not Available | Positive | 1641707 - 1642528 | 29326.9 |
| histidine kinase | APR48_07680 | Not Available | Positive | 1642525 - 1643655 | 41250.6 |
| hypothetical protein | APR48_07685 | Not Available | Positive | 1643652 - 1643903 | 8538.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
