Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR48_07535 | Not Available | Negative | 1604914 - 1605609 | 24782.2 |
| branched-chain amino acid permease/abc transporter atp-binding protein | APR48_07540 | Not Available | Negative | 1605593 - 1607440 | 64490.1 |
| abc transporter permease | APR48_07545 | Not Available | Negative | 1607460 - 1608326 | 29427.9 |
| abc transporter substrate-binding protein | APR48_07550 | Not Available | Negative | 1608339 - 1609586 | 44460.8 |
| sugar dehydrogenase | APR48_07555 | Not Available | Negative | 1609888 - 1610661 | 26594.8 |
| lysr family transcriptional regulator | APR48_07560 | Not Available | Positive | 1610776 - 1611681 | 32492.2 |
| hypothetical protein | APR48_07565 | Not Available | Positive | 1611760 - 1612476 | 26276.9 |
| hypothetical protein | APR48_07575 | Not Available | Positive | 1614474 - 1615022 | 20313.4 |
| hypothetical protein | APR48_07580 | Not Available | Negative | 1615043 - 1615708 | 24460.5 |
| hypothetical protein | APR48_07585 | Not Available | Positive | 1615890 - 1617722 | 67888.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
