Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR48_07435 | Not Available | Positive | 1587587 - 1588486 | 32178.6 |
| glutamate abc transporter permease | APR48_07440 | Not Available | Positive | 1588579 - 1589307 | 26796.2 |
| amino acid abc transporter permease | APR48_07445 | Not Available | Positive | 1589309 - 1589998 | 25564.0 |
| amino acid abc transporter atp-binding protein | APR48_07450 | Not Available | Positive | 1590037 - 1590774 | 27040.3 |
| dienelactone hydrolase | APR48_07455 | Not Available | Negative | 1590832 - 1591782 | 33814.4 |
| hypothetical protein | APR48_07460 | Not Available | Positive | 1592019 - 1592381 | 13660.2 |
| glutathione s-transferase | APR48_07465 | Not Available | Negative | 1592414 - 1593046 | 23949.6 |
| hxlr family transcriptional regulator | APR48_07470 | Not Available | Positive | 1593188 - 1593511 | 11976.8 |
| nucleoside hydrolase | APR48_07475 | Not Available | Negative | 1593542 - 1594519 | 34823.9 |
| dienelactone hydrolase | APR48_07480 | Not Available | Negative | 1594579 - 1595409 | 29673.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
