Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | APR48_07385 | Not Available | Positive | 1576222 - 1577061 | 30148.6 |
| disulfide bond formation protein dsba | APR48_07390 | Not Available | Positive | 1577127 - 1577720 | 21449.8 |
| enoyl-coa hydratase | APR48_07395 | Not Available | Positive | 1577758 - 1578522 | 27094.0 |
| abc transporter substrate-binding protein | APR48_07400 | Not Available | Positive | 1578766 - 1579872 | 40330.2 |
| thioesterase | APR48_07405 | Not Available | Negative | 1579888 - 1580316 | 15375.5 |
| metal abc transporter permease | APR48_07410 | Not Available | Positive | 1580358 - 1582202 | 67687.4 |
| hydroxyacid dehydrogenase | APR48_07415 | Not Available | Positive | 1582242 - 1583180 | 33009.7 |
| amidase | APR48_07420 | Not Available | Negative | 1583187 - 1584629 | 51793.0 |
| lysr family transcriptional regulator | APR48_07425 | Not Available | Positive | 1584739 - 1585725 | 36310.6 |
| aspartate ammonia-lyase | APR48_07430 | Not Available | Positive | 1585964 - 1587418 | 51700.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
