Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | APR48_07330 | Not Available | Positive | 1562863 - 1563621 | 26478.8 |
| tonb-dependent receptor | APR48_07335 | Not Available | Negative | 1563650 - 1566034 | 85906.3 |
| hypothetical protein | APR48_07340 | Not Available | Negative | 1566161 - 1567168 | 35949.7 |
| rna polymerase subunit sigma | APR48_07345 | Not Available | Negative | 1567239 - 1567751 | 18945.4 |
| tetr family transcriptional regulator | APR48_07350 | Not Available | Positive | 1568003 - 1568695 | 24843.8 |
| acyl-coa dehydrogenase | APR48_07355 | Not Available | Positive | 1568755 - 1570551 | 64765.1 |
| hypothetical protein | APR48_07360 | Not Available | Positive | 1570591 - 1571025 | 15522.6 |
| 3-hydroxyacyl-coa dehydrogenase | APR48_07365 | Not Available | Positive | 1571150 - 1573549 | 85605.4 |
| acetyl-coa acetyltransferase | APR48_07375 | Not Available | Positive | 1574045 - 1575241 | 41394.0 |
| alpha/beta hydrolase | APR48_07380 | Not Available | Positive | 1575295 - 1576194 | 33241.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
