Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase | APR48_07280 | Not Available | Positive | 1550900 - 1552174 | 45012.1 |
| 3-isopropylmalate dehydratase | APR48_07285 | Not Available | Positive | 1552171 - 1552692 | 18598.5 |
| mmge/prpd family protein | APR48_07290 | Not Available | Positive | 1552682 - 1554007 | 46133.2 |
| laci family transcriptional regulator | APR48_07295 | Not Available | Positive | 1554045 - 1555013 | 33496.9 |
| hydantoin utilization protein b | APR48_07300 | Not Available | Positive | 1555215 - 1556909 | 60156.1 |
| hydantoin utilization protein a | APR48_07305 | Not Available | Positive | 1556906 - 1558960 | 72240.9 |
| cysteine hydrolase | APR48_07310 | Not Available | Positive | 1558957 - 1559571 | 21483.7 |
| 3-ketosteroid dehydrogenase | APR48_07315 | Not Available | Positive | 1559568 - 1560983 | 48230.4 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | APR48_07320 | Not Available | Positive | 1560980 - 1561843 | 31203.3 |
| lysr family transcriptional regulator | APR48_07325 | Not Available | Negative | 1561847 - 1562734 | 32232.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
