Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | APR48_07230 | Not Available | Positive | 1542016 - 1542750 | 25224.5 |
| 3-oxoacyl-acp reductase | APR48_07235 | Not Available | Positive | 1542747 - 1543499 | 25922.0 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | APR48_07240 | Not Available | Positive | 1543547 - 1544395 | 30488.2 |
| gntr family transcriptional regulator | APR48_07245 | Not Available | Positive | 1544529 - 1545311 | 28839.0 |
| abc transporter substrate-binding protein | APR48_07250 | Not Available | Positive | 1545335 - 1546537 | 43417.5 |
| branched-chain amino acid abc transporter permease | APR48_07255 | Not Available | Positive | 1546599 - 1547471 | 30278.2 |
| abc transporter permease | APR48_07260 | Not Available | Positive | 1547468 - 1548445 | 33949.2 |
| abc transporter atp-binding protein | APR48_07265 | Not Available | Positive | 1548438 - 1549202 | 26733.6 |
| abc transporter atp-binding protein | APR48_07270 | Not Available | Positive | 1549199 - 1549909 | 25765.5 |
| mfs transporter | APR48_07275 | Not Available | Positive | 1549947 - 1550903 | 32941.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
