Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_07180 | Not Available | Positive | 1530465 - 1532105 | 59203.1 |
| dihydroorotate oxidase | APR48_07185 | Not Available | Positive | 1532209 - 1532856 | 23761.5 |
| catalase | APR48_07190 | Not Available | Positive | 1532978 - 1534501 | 57309.7 |
| dehydrogenase | APR48_07195 | Not Available | Negative | 1534507 - 1535568 | 37105.4 |
| gluconolactonase | APR48_07200 | Not Available | Negative | 1535572 - 1536504 | 34189.2 |
| galactonate dehydratase | APR48_07205 | Not Available | Negative | 1536518 - 1538044 | 53627.8 |
| abc transporter permease | APR48_07210 | Not Available | Negative | 1538047 - 1539444 | 49941.8 |
| abc transporter permease | APR48_07215 | Not Available | Negative | 1539472 - 1540029 | 21080.8 |
| abc transporter substrate-binding protein | APR48_07220 | Not Available | Negative | 1540123 - 1541133 | 36800.9 |
| gntr family transcriptional regulator | APR48_07225 | Not Available | Negative | 1541189 - 1541896 | 26044.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
