Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | APR48_07130 | Not Available | Negative | 1518544 - 1519266 | 25824.2 |
| abc transporter | APR48_07135 | Not Available | Negative | 1519273 - 1520079 | 30860.5 |
| mannose-1-phosphate guanyltransferase | APR48_07140 | Not Available | Negative | 1520076 - 1521494 | 51475.2 |
| glycosyl transferase family 2 | APR48_07145 | Not Available | Positive | 1521738 - 1523606 | 69246.0 |
| hypothetical protein | APR48_07150 | Not Available | Positive | 1523768 - 1525504 | 63533.1 |
| glycosyl transferase family 2 | APR48_07155 | Not Available | Positive | 1525501 - 1526529 | 38243.1 |
| glycosyl transferase family 2 | APR48_07160 | Not Available | Positive | 1526533 - 1527591 | 39229.4 |
| glycosyl transferase | APR48_07165 | Not Available | Negative | 1527605 - 1528363 | 28439.4 |
| glycosyl transferase | APR48_07170 | Not Available | Positive | 1528407 - 1529504 | 40299.7 |
| acetylglutamate kinase | APR48_07175 | Not Available | Positive | 1529563 - 1530456 | 31481.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
