Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | APR48_07080 | Not Available | Positive | 1505382 - 1506272 | 32103.2 |
| glucose-1-phosphate thymidylyltransferase | APR48_07085 | Not Available | Positive | 1506321 - 1507220 | 32729.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | APR48_07090 | Not Available | Positive | 1507217 - 1507765 | 20377.1 |
| hypothetical protein | APR48_07095 | Not Available | Negative | 1507784 - 1509238 | 54681.0 |
| hypothetical protein | APR48_07100 | Not Available | Negative | 1509225 - 1510460 | 45644.7 |
| gdp-mannose 4,6 dehydratase | APR48_07105 | Not Available | Negative | 1510579 - 1511619 | 38949.7 |
| hypothetical protein | APR48_07110 | Not Available | Positive | 1512378 - 1514216 | 66366.8 |
| hypothetical protein | APR48_07115 | Not Available | Positive | 1514222 - 1515361 | 43125.6 |
| gdp-fucose synthetase | APR48_07120 | Not Available | Positive | 1515420 - 1516376 | 35424.5 |
| group 1 glycosyl transferase | APR48_07125 | Not Available | Positive | 1516657 - 1518507 | 69655.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
