Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phzf family phenazine biosynthesis protein | APR48_07030 | Not Available | Negative | 1494347 - 1495180 | 28604.2 |
| lysine transporter lyse | APR48_07035 | Not Available | Negative | 1495191 - 1495829 | 22379.2 |
| 2-aminoadipate aminotransferase | APR48_07040 | Not Available | Negative | 1495855 - 1497057 | 42905.0 |
| multidrug dmt transporter permease | APR48_07045 | Not Available | Negative | 1497134 - 1498078 | 33091.5 |
| lysine transporter lyse | APR48_07050 | Not Available | Negative | 1498086 - 1498685 | 21369.8 |
| gntr family transcriptional regulator | APR48_07055 | Not Available | Positive | 1498786 - 1500228 | 52840.8 |
| hypothetical protein | APR48_07060 | Not Available | Positive | 1500299 - 1501075 | 27105.0 |
| hypothetical protein | APR48_07065 | Not Available | Positive | 1501116 - 1502393 | 44365.7 |
| amino acid dehydrogenase | APR48_07070 | Not Available | Negative | 1502542 - 1503849 | 47599.0 |
| dtdp-glucose 4,6-dehydratase | APR48_07075 | Not Available | Positive | 1504315 - 1505385 | 39822.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
