Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase | APR48_06980 | Not Available | Negative | 1485809 - 1486525 | 27195.2 |
| lysr family transcriptional regulator | APR48_06985 | Not Available | Positive | 1486648 - 1487631 | 34614.3 |
| transposase | APR48_06990 | Not Available | Negative | 1487632 - 1488516 | 33263.4 |
| 3-oxoacyl-acp reductase | APR48_06995 | Not Available | Negative | 1488712 - 1489509 | 27186.0 |
| creatininase | APR48_07000 | Not Available | Positive | 1489574 - 1490401 | 28531.2 |
| hypothetical protein | APR48_07005 | Not Available | Negative | 1490430 - 1491395 | 34233.8 |
| lysine transporter lyse | APR48_07010 | Not Available | Negative | 1491401 - 1492033 | 22357.1 |
| hypothetical protein | APR48_07015 | Not Available | Negative | 1492035 - 1492727 | 24535.5 |
| phenazine biosynthesis protein phzf | APR48_07020 | Not Available | Negative | 1492745 - 1493668 | 32333.8 |
| glutathione s-transferase | APR48_07025 | Not Available | Negative | 1493672 - 1494313 | 24366.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
