Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_06930 | Not Available | Negative | 1473173 - 1473508 | 11867.1 |
| hypothetical protein | APR48_06935 | Not Available | Negative | 1473625 - 1477716 | 143958.0 |
| hypothetical protein | APR48_06940 | Not Available | Negative | 1477722 - 1479665 | 70488.0 |
| hypothetical protein | APR48_06945 | Not Available | Negative | 1479801 - 1480988 | 46217.0 |
| gcn5 family acetyltransferase | APR48_06950 | Not Available | Negative | 1481008 - 1481595 | 21768.2 |
| hypothetical protein | APR48_06955 | Not Available | Negative | 1481619 - 1481867 | 8624.7 |
| aaa family atpase | APR48_06960 | Not Available | Negative | 1481881 - 1482735 | 32576.6 |
| cytochrome c | APR48_06965 | Not Available | Positive | 1482886 - 1483581 | 24664.7 |
| 4-hydroxybenzoate transporter | APR48_06970 | Not Available | Negative | 1483668 - 1485038 | 47391.0 |
| protocatechuate 3,4-dioxygenase | APR48_06975 | Not Available | Negative | 1485171 - 1485785 | 22334.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
