Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydropantoate 2-reductase | APR48_06880 | Not Available | Positive | 1460290 - 1461300 | 36126.9 |
| pyruvate kinase | APR48_06885 | Not Available | Positive | 1461314 - 1462738 | 51195.9 |
| transcriptional regulator | APR48_06890 | Not Available | Positive | 1462827 - 1463756 | 34144.6 |
| oxalate/formate mfs antiporter | APR48_06895 | Not Available | Positive | 1464491 - 1465819 | 47545.6 |
| hypothetical protein | APR48_06900 | Not Available | Positive | 1465873 - 1466361 | 16866.2 |
| formate dehydrogenase | APR48_06905 | Not Available | Positive | 1466824 - 1467315 | 17440.7 |
| formate dehydrogenase | APR48_06910 | Not Available | Positive | 1467312 - 1468877 | 55230.6 |
| formate dehydrogenase | APR48_06915 | Not Available | Positive | 1469043 - 1471919 | 104887.0 |
| formate dehydrogenase family accessory protein fdhd | APR48_06920 | Not Available | Positive | 1471939 - 1472820 | 30633.4 |
| formate dehydrogenase | APR48_06925 | Not Available | Positive | 1472863 - 1473165 | 10589.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
