Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | APR48_06830 | Not Available | Positive | 1450095 - 1450931 | 30412.7 |
| cyclic nucleotide-binding protein | APR48_06835 | Not Available | Negative | 1450938 - 1451546 | 23204.4 |
| oxalyl-coa decarboxylase | APR48_06840 | Not Available | Positive | 1451703 - 1453541 | 64566.9 |
| formyl-coenzyme a transferase | APR48_06845 | Not Available | Positive | 1453567 - 1454820 | 45675.5 |
| histidine kinase | APR48_06850 | Not Available | Positive | 1454904 - 1455347 | 16387.7 |
| formyl-coenzyme a transferase | APR48_06855 | Not Available | Positive | 1455344 - 1456591 | 45318.4 |
| hypothetical protein | APR48_06860 | Not Available | Positive | 1456844 - 1457176 | 12887.0 |
| succinyl-coa synthetase subunit beta | APR48_06865 | Not Available | Positive | 1457212 - 1458390 | 42038.7 |
| succinate--coa ligase | APR48_06870 | Not Available | Positive | 1458531 - 1459430 | 31608.7 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | APR48_06875 | Not Available | Positive | 1459492 - 1460259 | 27733.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
