Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa transferase | APR48_06780 | Not Available | Negative | 1440587 - 1441813 | 44114.8 |
| iclr family transcriptional regulator | APR48_06785 | Not Available | Positive | 1441980 - 1442789 | 29734.2 |
| acyl-coa dehydrogenase | APR48_06790 | Not Available | Positive | 1442814 - 1443974 | 41900.3 |
| abc transporter substrate-binding protein | APR48_06795 | Not Available | Positive | 1444025 - 1445005 | 33988.5 |
| 2-nitropropane dioxygenase | APR48_06800 | Not Available | Positive | 1445002 - 1446114 | 39520.5 |
| Trna-arg | Not Available | Not Available | Positive | 1446196 - 1446270 | Not Available |
| hypothetical protein | APR48_06810 | Not Available | Negative | 1446329 - 1446532 | 7625.45 |
| tricarboxylate transporter | APR48_06815 | Not Available | Positive | 1446856 - 1447872 | 36382.4 |
| tripartite tricarboxylate transporter tctb | APR48_06820 | Not Available | Positive | 1448002 - 1448526 | 18894.5 |
| tricarboxylate transporter | APR48_06825 | Not Available | Positive | 1448549 - 1450078 | 53822.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
