Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase catalytic subunit | APR48_06680 | Not Available | Positive | 1418047 - 1419009 | 34825.4 |
| dihydroorotase | APR48_06685 | Not Available | Positive | 1419006 - 1420289 | 44206.3 |
| glycerol acyltransferase | APR48_06690 | Not Available | Positive | 1420343 - 1421089 | 27671.3 |
| hypothetical protein | APR48_06695 | Not Available | Negative | 1421102 - 1422022 | 33281.2 |
| iclr family transcriptional regulator | APR48_06700 | Not Available | Negative | 1422627 - 1423433 | 28720.1 |
| 3-oxosteroid 1-dehydrogenase | APR48_06705 | Not Available | Positive | 1423619 - 1425376 | 62235.9 |
| 3-oxoacyl-acp reductase | APR48_06710 | Not Available | Positive | 1425424 - 1426200 | 26782.4 |
| branched-chain amino acid abc transporter substrate-binding protein | APR48_06715 | Not Available | Positive | 1426253 - 1427452 | 42722.5 |
| abc transporter permease | APR48_06720 | Not Available | Positive | 1427522 - 1428445 | 31614.9 |
| abc transporter atp-binding protein | APR48_06725 | Not Available | Positive | 1428442 - 1430238 | 63459.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
