Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_17705 | Not Available | Positive | 3762313 - 3762717 | 14137.5 |
| hypothetical protein | APR48_17710 | Not Available | Positive | 3762714 - 3763118 | 14668.2 |
| Lysin | APR48_17715 | Not Available | Positive | 3763115 - 3763657 | 19628.3 |
| hypothetical protein | APR48_17720 | Not Available | Negative | 3763731 - 3764237 | 17002.0 |
| O-antigen beta polymerase | APR48_17725 | Not Available | Negative | 3764218 - 3765468 | 46495.6 |
| hypothetical protein | APR48_17730 | Not Available | Negative | 3765481 - 3766377 | 33360.0 |
| hypothetical protein | APR48_17735 | Not Available | Negative | 3766398 - 3766625 | 8720.63 |
| Integrase | APR48_17740 | Not Available | Negative | 3766840 - 3767802 | 37099.4 |
| Attr | Not Available | Not Available | Positive | 3781143 - 3781154 | Not Available |
| conjugal transfer protein trbf | APR48_00005 | Not Available | Positive | 100 - 801 | 25995.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
