Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | APR48_06580 | Not Available | Positive | 1393936 - 1394610 | 24870.3 |
| hypothetical protein | APR48_06585 | Not Available | Negative | 1394620 - 1395090 | 17155.5 |
| pp_01303 | APR48_06590 | Not Available | Positive | 1395285 - 1396343 | Not Available |
| fis family transcriptional regulator | APR48_06595 | Not Available | Positive | 1396361 - 1396597 | 9102.19 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | APR48_06600 | Not Available | Positive | 1396624 - 1398231 | 56836.8 |
| hypothetical protein | APR48_06605 | Not Available | Negative | 1398300 - 1398803 | 19033.8 |
| lysr family transcriptional regulator | APR48_06610 | Not Available | Negative | 1398955 - 1399851 | 32821.5 |
| abc transporter substrate-binding protein | APR48_06615 | Not Available | Positive | 1400021 - 1400998 | 33869.1 |
| amidase | APR48_06620 | Not Available | Positive | 1401028 - 1402428 | 49309.1 |
| glutamate-1-semialdehyde aminotransferase | APR48_06625 | Not Available | Negative | 1402438 - 1403724 | 45347.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
