Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose pyranase | APR48_06530 | Not Available | Negative | 1383625 - 1384023 | 14146.3 |
| ribokinase | APR48_06535 | Not Available | Negative | 1384020 - 1384916 | 30707.8 |
| laci family transcriptional regulator | APR48_06540 | Not Available | Negative | 1384976 - 1386055 | 38506.2 |
| abc transporter permease | APR48_06545 | Not Available | Negative | 1386104 - 1387096 | 33412.8 |
| sugar abc transporter atp-binding protein | APR48_06550 | Not Available | Negative | 1387117 - 1388685 | 56207.6 |
| laci family transcriptional regulator | APR48_06555 | Not Available | Negative | 1388744 - 1389700 | 33360.6 |
| gtp-binding protein | APR48_06560 | Not Available | Positive | 1389910 - 1391001 | 39460.3 |
| hypothetical protein | APR48_06565 | Not Available | Positive | 1391489 - 1392340 | 31086.7 |
| hypothetical protein | APR48_06570 | Not Available | Positive | 1392358 - 1392786 | 15830.1 |
| peptidase s1 | APR48_06575 | Not Available | Negative | 1392789 - 1393751 | 33694.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
