Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| emrb/qaca subfamily drug resistance transporter | APR48_06320 | Not Available | Positive | 1339853 - 1341295 | 50401.3 |
| anhydro-n-acetylmuramic acid kinase | APR48_06325 | Not Available | Negative | 1341297 - 1342427 | 38690.2 |
| peptidase m23 | APR48_06330 | Not Available | Negative | 1342490 - 1343839 | 47771.1 |
| tyrosine--trna ligase | APR48_06335 | Not Available | Positive | 1343998 - 1345230 | 44914.8 |
| flagellar motor protein motb | APR48_06340 | Not Available | Negative | 1345294 - 1345923 | 22493.9 |
| hypothetical protein | APR48_06345 | Not Available | Negative | 1345923 - 1346435 | 17378.0 |
| cation diffusion facilitator family transporter | APR48_06350 | Not Available | Positive | 1346586 - 1347515 | 33424.7 |
| d-tyrosyl-trna(tyr) deacylase | APR48_06355 | Not Available | Positive | 1347512 - 1347952 | 15393.7 |
| hypothetical protein | APR48_06360 | Not Available | Negative | 1347971 - 1348564 | 22003.2 |
| rrna maturation factor | APR48_06365 | Not Available | Negative | 1348579 - 1349037 | 16999.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
