Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phasin | APR48_06270 | Not Available | Negative | 1331600 - 1332094 | 17719.3 |
| hypothetical protein | APR48_06275 | Not Available | Negative | 1332293 - 1332961 | 23425.5 |
| adenosylhomocysteinase | APR48_06280 | Not Available | Positive | 1333255 - 1334694 | 51985.4 |
| hemolysin | APR48_06285 | Not Available | Positive | 1334704 - 1335492 | 28068.5 |
| 5,10-methylenetetrahydrofolate reductase | APR48_06290 | Not Available | Positive | 1335503 - 1336327 | 29685.4 |
| hypothetical protein | APR48_06295 | Not Available | Positive | 1336414 - 1337049 | 22500.8 |
| competence protein comj | APR48_06300 | Not Available | Negative | 1337055 - 1338005 | 34117.0 |
| 50s ribosomal protein l13 | APR48_06305 | Not Available | Positive | 1338362 - 1338790 | 15622.1 |
| 30s ribosomal protein s9 | APR48_06310 | Not Available | Positive | 1338803 - 1339195 | 14283.3 |
| iron-sulfur cluster insertion protein erpa | APR48_06315 | Not Available | Positive | 1339399 - 1339764 | 12923.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
