Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_06220 | Not Available | Negative | 1322595 - 1323248 | 23517.6 |
| peptide chain release factor 3 | APR48_06225 | Not Available | Negative | 1323292 - 1324920 | 60245.3 |
| pyrroloquinoline quinone biosynthesis protein pqqe | APR48_06230 | Not Available | Negative | 1324999 - 1326156 | 42771.1 |
| pyrroloquinoline quinone biosynthesis protein pqqd | APR48_06235 | Not Available | Negative | 1326153 - 1326428 | 10102.2 |
| pyrroloquinoline quinone biosynthesis protein pqqc | APR48_06240 | Not Available | Negative | 1326425 - 1327171 | 27685.9 |
| pyrroloquinoline quinone biosynthesis protein pqqb | APR48_06245 | Not Available | Negative | 1327211 - 1328131 | 32527.9 |
| hypothetical protein | APR48_06250 | Not Available | Positive | 1328469 - 1329452 | 34857.3 |
| acetyltransferase | APR48_06255 | Not Available | Negative | 1329428 - 1330045 | 22209.7 |
| poly-beta-hydroxybutyrate polymerase | APR48_06260 | Not Available | Negative | 1330042 - 1331118 | 40187.7 |
| hypothetical protein | APR48_06265 | Not Available | Negative | 1331115 - 1331534 | 15109.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
