Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase | APR48_06170 | Not Available | Positive | 1312705 - 1313754 | 37878.5 |
| acetylpolyamine aminohydrolase | APR48_06175 | Not Available | Positive | 1313798 - 1314838 | 37114.7 |
| hypothetical protein | APR48_06180 | Not Available | Positive | 1314942 - 1315916 | 34654.9 |
| addiction module protein | APR48_06185 | Not Available | Positive | 1316040 - 1317143 | 40911.2 |
| tetr family transcriptional regulator | APR48_06190 | Not Available | Negative | 1317151 - 1317744 | 21156.2 |
| mfs transporter | APR48_06195 | Not Available | Positive | 1317854 - 1319107 | 42330.2 |
| had family hydrolase | APR48_06200 | Not Available | Negative | 1319104 - 1319877 | 27567.7 |
| abc transporter | APR48_06205 | Not Available | Positive | 1319926 - 1320933 | 37129.9 |
| abc transporter permease | APR48_06210 | Not Available | Positive | 1320930 - 1321775 | 30122.6 |
| abc transporter permease | APR48_06215 | Not Available | Positive | 1321783 - 1322598 | 29219.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
