Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | APR48_17655 | Not Available | Positive | 3745367 - 3745801 | 14742.3 |
| hypothetical protein | APR48_17660 | Not Available | Positive | 3745864 - 3746346 | 17003.2 |
| Hypothetical protein | APR48_17665 | Not Available | Positive | 3746413 - 3746868 | 15514.9 |
| Hypothetical protein | APR48_17670 | Not Available | Positive | 3746875 - 3747522 | 23675.2 |
| Hypothetical protein | APR48_17675 | Not Available | Positive | 3747522 - 3750140 | 94554.0 |
| Aminoglycoside acetyltransferase | APR48_17680 | Not Available | Positive | 3750142 - 3750621 | 17569.2 |
| Hypothetical protein | APR48_17685 | Not Available | Positive | 3750611 - 3751183 | 19814.9 |
| Tail fiber protein | APR48_17690 | Not Available | Positive | 3751187 - 3753427 | 79624.2 |
| Crystallin beta/gamma motif-containing protein | APR48_17695 | Not Available | Positive | 3753427 - 3759630 | 223126.0 |
| Putative tail fiber protein | APR48_17700 | Not Available | Positive | 3759627 - 3762302 | 94266.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
