Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro)/cys-trna(cys) deacylase | APR48_06120 | Not Available | Positive | 1297325 - 1297825 | 17686.3 |
| fe-s oxidoreductase | APR48_06125 | Not Available | Positive | 1297822 - 1298085 | 9786.59 |
| disulfide bond formation protein dsba | APR48_06130 | Not Available | Positive | 1298082 - 1298726 | 23501.1 |
| mfs transporter | APR48_06135 | Not Available | Positive | 1298902 - 1300596 | 60544.8 |
| amino acid abc transporter substrate-binding protein | APR48_06140 | Not Available | Negative | 1300909 - 1302030 | 39364.6 |
| amino acid abc transporter substrate-binding protein | APR48_06145 | Not Available | Negative | 1302195 - 1303313 | 38918.2 |
| excinuclease abc subunit a | APR48_06150 | Not Available | Positive | 1303493 - 1309288 | 209515.0 |
| hypothetical protein | APR48_06155 | Not Available | Negative | 1309293 - 1310243 | 33498.9 |
| abc transporter substrate-binding protein | APR48_06160 | Not Available | Positive | 1310357 - 1311343 | 34413.1 |
| n-acyl-l-amino acid amidohydrolase | APR48_06165 | Not Available | Positive | 1311388 - 1312560 | 41881.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
