Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_06070 | Not Available | Negative | 1285464 - 1286414 | 33024.0 |
| citrate synthase | APR48_06075 | Not Available | Negative | 1286411 - 1287217 | 27793.5 |
| hydroxyquinol 1,2-dioxygenase | APR48_06080 | Not Available | Negative | 1287214 - 1288128 | 33121.1 |
| carnitine dehydratase | APR48_06085 | Not Available | Negative | 1288169 - 1289317 | 41953.9 |
| lysr family transcriptional regulator | APR48_06090 | Not Available | Positive | 1289455 - 1290360 | 33348.7 |
| hydroxymethylglutaryl-coa lyase | APR48_06095 | Not Available | Positive | 1290496 - 1291416 | 32515.1 |
| protein kinase | APR48_06100 | Not Available | Negative | 1291423 - 1293165 | 63124.5 |
| formate transporter | APR48_06105 | Not Available | Negative | 1293176 - 1293988 | 28781.1 |
| acyltransferase | APR48_06110 | Not Available | Negative | 1294038 - 1294379 | 12068.4 |
| nitrite reductase | APR48_06115 | Not Available | Negative | 1294403 - 1296931 | 91200.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
