Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_06020 | Not Available | Positive | 1276969 - 1277949 | 35751.2 |
| ethyl tert-butyl ether degradation protein ethd | APR48_06025 | Not Available | Negative | 1277996 - 1278310 | 11407.8 |
| hypothetical protein | APR48_06030 | Not Available | Positive | 1278420 - 1278809 | 14528.6 |
| glyoxylate/hydroxypyruvate reductase a | APR48_06035 | Not Available | Positive | 1278864 - 1279784 | 33967.9 |
| iclr family transcriptional regulator | APR48_06040 | Not Available | Positive | 1279875 - 1280624 | 27487.4 |
| cupin | APR48_06045 | Not Available | Positive | 1280621 - 1281013 | 14252.0 |
| abc transporter substrate-binding protein | APR48_06050 | Not Available | Positive | 1281039 - 1282049 | 35192.9 |
| acetyl-coa acetyltransferase | APR48_06055 | Not Available | Positive | 1282046 - 1283281 | 43714.4 |
| acyl-coa dehydrogenase | APR48_06060 | Not Available | Positive | 1283278 - 1284447 | 42502.2 |
| hypothetical protein | APR48_06065 | Not Available | Negative | 1284451 - 1285455 | 36035.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
