Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_05970 | Not Available | Positive | 1264574 - 1265380 | 29494.6 |
| lysr family transcriptional regulator | APR48_05975 | Not Available | Positive | 1265478 - 1266548 | 40394.2 |
| abc transporter substrate-binding protein | APR48_05980 | Not Available | Positive | 1266593 - 1267564 | 33897.0 |
| arac family transcriptional regulator | APR48_05985 | Not Available | Negative | 1267586 - 1268662 | 40129.4 |
| isovaleryl-coa dehydrogenase | APR48_05990 | Not Available | Positive | 1268804 - 1269976 | 42391.7 |
| amp-binding protein | APR48_05995 | Not Available | Positive | 1270032 - 1271705 | 61682.4 |
| methylcrotonoyl-coa carboxylase | APR48_06000 | Not Available | Positive | 1271748 - 1273355 | 57145.5 |
| enoyl-coa hydratase | APR48_06005 | Not Available | Positive | 1273369 - 1274169 | 28144.8 |
| hypothetical protein | APR48_06010 | Not Available | Positive | 1274186 - 1274857 | 23318.9 |
| 3-methylcrotonyl-coa carboxylase | APR48_06015 | Not Available | Positive | 1274850 - 1276850 | 71692.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
