Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug dmt transporter permease | APR48_05920 | Not Available | Negative | 1254314 - 1255504 | 42507.6 |
| iron transporter | APR48_05925 | Not Available | Negative | 1255515 - 1256348 | 29306.7 |
| phosphodiesterase | APR48_05930 | Not Available | Negative | 1256517 - 1256978 | 16077.5 |
| aconitate hydratase | APR48_05935 | Not Available | Negative | 1256984 - 1259860 | 103485.0 |
| hypothetical protein | APR48_05940 | Not Available | Negative | 1260052 - 1260477 | 14386.0 |
| had family hydrolase | APR48_05945 | Not Available | Positive | 1260962 - 1261651 | 24348.1 |
| thioredoxin | APR48_05950 | Not Available | Positive | 1261746 - 1262072 | 11646.9 |
| lysr family transcriptional regulator | APR48_05955 | Not Available | Negative | 1262060 - 1262977 | 32295.4 |
| 3-phosphoglycerate dehydrogenase | APR48_05960 | Not Available | Positive | 1263048 - 1264046 | 36460.0 |
| hypothetical protein | APR48_05965 | Not Available | Positive | 1264043 - 1264504 | 16138.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
