Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kynurenine formamidase | APR48_05870 | Not Available | Positive | 1244129 - 1244767 | 22725.3 |
| kynureninase | APR48_05875 | Not Available | Positive | 1244781 - 1246061 | 46335.1 |
| tryptophan 2,3-dioxygenase | APR48_05880 | Not Available | Positive | 1246058 - 1246906 | 32491.0 |
| hypothetical protein | APR48_05885 | Not Available | Positive | 1246988 - 1248238 | 44664.1 |
| fad-dependent oxidoreductase | APR48_05890 | Not Available | Negative | 1248235 - 1249419 | 40944.9 |
| hypothetical protein | APR48_05895 | Not Available | Negative | 1249425 - 1249700 | 9319.97 |
| iron transporter feob | APR48_05900 | Not Available | Negative | 1249726 - 1251621 | 67622.0 |
| iron transporter feoa | APR48_05905 | Not Available | Negative | 1251614 - 1251928 | 11031.2 |
| iron transporter | APR48_05910 | Not Available | Negative | 1252082 - 1252870 | 28935.4 |
| peroxidase | APR48_05915 | Not Available | Negative | 1252975 - 1254291 | 47221.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
