Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | APR48_05820 | Not Available | Negative | 1236327 - 1236758 | 15923.1 |
| glyoxalase | APR48_05825 | Not Available | Negative | 1236918 - 1237343 | 15391.5 |
| transglutaminase | APR48_05830 | Not Available | Negative | 1237343 - 1238197 | 31692.8 |
| hypothetical protein | APR48_05835 | Not Available | Negative | 1238286 - 1239839 | 55236.5 |
| 30s ribosomal protein s20 | APR48_05840 | Not Available | Positive | 1239956 - 1240270 | 11245.7 |
| hypothetical protein | APR48_05845 | Not Available | Negative | 1240409 - 1240774 | 13322.8 |
| acetylornithine aminotransferase | APR48_05850 | Not Available | Positive | 1240945 - 1242153 | 42909.3 |
| ornithine carbamoyltransferase | APR48_05855 | Not Available | Positive | 1242150 - 1243085 | 34920.5 |
| fe-s oxidoreductase | APR48_05860 | Not Available | Positive | 1243123 - 1243440 | 11282.3 |
| asnc family transcriptional regulator | APR48_05865 | Not Available | Negative | 1243441 - 1243917 | 17488.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
