Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | APR48_05770 | Not Available | Negative | 1226963 - 1227424 | 16248.6 |
| poly(a) polymerase | APR48_05775 | Not Available | Negative | 1227679 - 1229289 | 59319.8 |
| dnaa regulatory inactivator hda | APR48_05780 | Not Available | Negative | 1229309 - 1230010 | 25630.8 |
| phosphoribosylaminoimidazole synthetase | APR48_05785 | Not Available | Positive | 1230139 - 1231179 | 35961.6 |
| permease | APR48_05790 | Not Available | Positive | 1231215 - 1232285 | 38265.4 |
| hydrolase | APR48_05795 | Not Available | Positive | 1232414 - 1232971 | 19777.5 |
| thiamine biosynthesis protein thij | APR48_05800 | Not Available | Positive | 1232968 - 1233600 | 22238.7 |
| arac family transcriptional regulator | APR48_05805 | Not Available | Positive | 1233579 - 1234589 | 35732.1 |
| rna polymerase subunit sigma-24 | APR48_05810 | Not Available | Negative | 1234591 - 1235877 | 46374.0 |
| transcription initiation protein | APR48_05815 | Not Available | Negative | 1235882 - 1236310 | 15305.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
