Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein mutt | APR48_05720 | Not Available | Negative | 1219097 - 1219822 | 25997.0 |
| 50s ribosomal protein l19 | APR48_05725 | Not Available | Negative | 1219958 - 1220338 | 13995.9 |
| trna (guanine-n1)-methyltransferase | APR48_05730 | Not Available | Negative | 1220449 - 1221195 | 27150.5 |
| 16s rrna processing protein rimm | APR48_05735 | Not Available | Negative | 1221225 - 1221779 | 19951.7 |
| 30s ribosomal protein s16 | APR48_05740 | Not Available | Negative | 1221798 - 1222061 | 9670.72 |
| gcn5 family acetyltransferase | APR48_05745 | Not Available | Positive | 1222279 - 1222800 | 18456.0 |
| hypothetical protein | APR48_05750 | Not Available | Positive | 1222832 - 1223278 | 16364.0 |
| porin | APR48_05755 | Not Available | Negative | 1223379 - 1224671 | 45302.8 |
| inorganic phosphate transporter | APR48_05760 | Not Available | Negative | 1225093 - 1226103 | 35295.7 |
| phosphate transport regulator | APR48_05765 | Not Available | Negative | 1226117 - 1226761 | 24687.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
