Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | APR48_05670 | Not Available | Negative | 1208286 - 1209095 | 29413.2 |
| 3-hydroxybutyryl-coa dehydrogenase | APR48_05675 | Not Available | Negative | 1209092 - 1210090 | 35816.2 |
| glycerol-3-phosphate dehydrogenase | APR48_05680 | Not Available | Negative | 1210080 - 1211153 | 38513.1 |
| dead/deah box helicase | APR48_05685 | Not Available | Negative | 1211353 - 1213275 | 68973.5 |
| oligoribonuclease | APR48_05690 | Not Available | Negative | 1213606 - 1214202 | 22081.3 |
| peptidase m48 | APR48_05695 | Not Available | Positive | 1214262 - 1215530 | 46454.3 |
| pterin-4-alpha-carbinolamine dehydratase | APR48_05700 | Not Available | Positive | 1215579 - 1215935 | 12825.2 |
| gtpase rsga | APR48_05705 | Not Available | Positive | 1215951 - 1216904 | 34704.2 |
| histidinol-phosphate aminotransferase | APR48_05710 | Not Available | Negative | 1216898 - 1218007 | 40897.9 |
| cobalamin biosynthesis protein cbib | APR48_05715 | Not Available | Negative | 1218012 - 1219013 | 36431.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
