Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | APR48_17605 | Not Available | Positive | 3738070 - 3738258 | 6888.42 |
| Hypothetical protein | APR48_17610 | Not Available | Positive | 3738255 - 3738785 | 19779.9 |
| Putative phage terminase, large subunit | APR48_17615 | Not Available | Positive | 3738856 - 3740319 | 54369.6 |
| hypothetical protein | APR48_17620 | Not Available | Positive | 3740347 - 3740685 | 10668.7 |
| Phage head-tail connector protein | APR48_17625 | Not Available | Positive | 3740685 - 3742403 | 63478.5 |
| hypothetical protein | APR48_17630 | Not Available | Positive | 3742414 - 3742617 | 7095.26 |
| Hypothetical protein | APR48_17635 | Not Available | Positive | 3742614 - 3742925 | 10971.8 |
| Bbp19 | APR48_17640 | Not Available | Positive | 3743181 - 3743441 | 9613.54 |
| Putative peptidase | APR48_17645 | Not Available | Positive | 3743416 - 3744150 | 25014.8 |
| Major capsid protein | APR48_17650 | Not Available | Positive | 3744280 - 3745329 | 37506.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
