Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclase | APR48_05620 | Not Available | Negative | 1195966 - 1196778 | 29452.9 |
| short-chain dehydrogenase | APR48_05625 | Not Available | Negative | 1196811 - 1198067 | 45432.6 |
| acetyl-coa acetyltransferase | APR48_05630 | Not Available | Negative | 1198064 - 1199242 | 42304.2 |
| atp-dependent acyl-coa ligase | APR48_05635 | Not Available | Negative | 1199444 - 1201072 | 58788.1 |
| phenylpropionate dioxygenase | APR48_05640 | Not Available | Negative | 1201089 - 1201574 | 19022.6 |
| oxidoreductase | APR48_05645 | Not Available | Negative | 1201574 - 1202890 | 49203.3 |
| ferredoxin | APR48_05650 | Not Available | Negative | 1202908 - 1203894 | 35518.5 |
| indolepyruvate oxidoreductase subunit b | APR48_05655 | Not Available | Negative | 1203918 - 1205411 | 53736.6 |
| indolepyruvate ferredoxin oxidoreductase | APR48_05660 | Not Available | Negative | 1205420 - 1207591 | 77728.3 |
| marr family transcriptional regulator | APR48_05665 | Not Available | Positive | 1207790 - 1208281 | 18408.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
