Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR48_05570 | Not Available | Negative | 1183693 - 1184433 | 26438.0 |
| hypothetical protein | APR48_05575 | Not Available | Negative | 1184430 - 1186214 | 62684.0 |
| abc transporter permease | APR48_05580 | Not Available | Negative | 1186211 - 1187266 | 36288.7 |
| branched-chain amino acid abc transporter substrate-binding protein | APR48_05585 | Not Available | Negative | 1187342 - 1188502 | 40648.4 |
| aromatic-ring-hydroxylating dioxygenase | APR48_05590 | Not Available | Negative | 1188550 - 1189014 | 17627.1 |
| oxidoreductase | APR48_05595 | Not Available | Negative | 1189011 - 1190342 | 49394.6 |
| branched-chain amino acid abc transporter substrate-binding protein | APR48_05600 | Not Available | Negative | 1190365 - 1191462 | 37958.6 |
| penicillin amidase | APR48_05605 | Not Available | Negative | 1191536 - 1193995 | 88408.4 |
| branched-chain amino acid abc transporter substrate-binding protein | APR48_05610 | Not Available | Negative | 1194019 - 1195185 | 40809.2 |
| short-chain dehydrogenase | APR48_05615 | Not Available | Negative | 1195238 - 1195969 | 25449.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
