Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 1169578 - 1169653 | Not Available |
| hypothetical protein | APR48_05525 | Not Available | Positive | 1170357 - 1170755 | 14753.7 |
| hypothetical protein | APR48_05530 | Not Available | Negative | 1170766 - 1171491 | 26192.4 |
| hypothetical protein | APR48_05535 | Not Available | Negative | 1171633 - 1177719 | 221216.0 |
| hypothetical protein | APR48_05540 | Not Available | Negative | 1177789 - 1179546 | 63415.1 |
| hypothetical protein | APR48_05545 | Not Available | Negative | 1179543 - 1180130 | 21713.3 |
| 4-hydroxybenzoyl-coa thioesterase | APR48_05550 | Not Available | Negative | 1180304 - 1180750 | 16462.1 |
| marr family transcriptional regulator | APR48_05555 | Not Available | Negative | 1180754 - 1181284 | 20068.1 |
| 3-hydroxyacyl-coa dehydrogenase | APR48_05560 | Not Available | Negative | 1181281 - 1182060 | 26560.7 |
| atp-dependent acyl-coa ligase | APR48_05565 | Not Available | Negative | 1182123 - 1183703 | 56517.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
