Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_05255 | Not Available | Positive | 1115724 - 1115990 | 9468.32 |
| hypothetical protein | APR48_05260 | Not Available | Negative | 1115959 - 1116663 | 23951.8 |
| coproporphyrinogen iii oxidase | APR48_05265 | Not Available | Negative | 1116666 - 1118042 | 51407.8 |
| hypothetical protein | APR48_05270 | Not Available | Negative | 1118069 - 1118338 | 9521.7 |
| nitrogen fixation protein fixh | APR48_05275 | Not Available | Negative | 1118335 - 1118610 | 10126.2 |
| cytochrome c oxidase | APR48_05280 | Not Available | Negative | 1118662 - 1120074 | 53618.8 |
| cytochrome oxidase subunit iii | APR48_05285 | Not Available | Negative | 1120097 - 1121014 | 32934.3 |
| cytochrome oxidase | APR48_05290 | Not Available | Negative | 1121028 - 1121165 | 5118.24 |
| cytochrome c oxidase cbb3 | APR48_05295 | Not Available | Negative | 1121188 - 1121817 | 23516.3 |
| cytochrome c oxidase cbb3 | APR48_05300 | Not Available | Negative | 1121827 - 1123266 | 53555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
