Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR48_05150 | Not Available | Negative | 1095927 - 1096610 | 24841.1 |
| hypothetical protein | APR48_05160 | Not Available | Negative | 1097444 - 1097923 | 16545.1 |
| universal stress protein uspa | APR48_05165 | Not Available | Positive | 1098137 - 1098595 | 16165.4 |
| hypothetical protein | APR48_05170 | Not Available | Positive | 1098658 - 1099269 | 20784.0 |
| transporter | APR48_05175 | Not Available | Positive | 1099302 - 1099547 | 8857.61 |
| hypothetical protein | APR48_05180 | Not Available | Positive | 1099689 - 1100474 | 28452.4 |
| hypothetical protein | APR48_05185 | Not Available | Negative | 1100762 - 1100974 | 7588.27 |
| hypothetical protein | APR48_05190 | Not Available | Negative | 1101161 - 1101574 | 14217.3 |
| phosphoketolase | APR48_05195 | Not Available | Positive | 1101771 - 1104140 | 88029.9 |
| two-component system response regulator | APR48_05200 | Not Available | Positive | 1104246 - 1104974 | 26547.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
